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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015877742.1_cds_XP_016436559.1_32400
CDS Infomation

[gene=LOC107762695] [db_xref=GeneID:107762695] [protein=putative pectinesterase 11 isoform X2] [protein_id=XP_016436559.1] [location=join(15206..15465,15664..15823,15969..16157,16470..16702,16876..16882)] [gbkey=CDS]
Sequence

ATGGATGCTGCTTCATTGATAATCAAATTTCATGTTATATTTCTCATACTCCTACTAGTT
TGTTCTAATAGTAATTCAACTTTAACCATGGCTGCCAATGACTCTAGTTCAGGAGGACCT
ACGAATTTTTCTACGGCCATTCTTATTAGAGTAGACCAATCTGGTCAAGGAGATTTCAAG
AAAATCCAAGACGCTATTGATGCTGTTCCATCGAATAATTCAGAATTATTCTTCATTTGG
GTTAAGCCAGGGACTTATAGAGAGAAGATTGTGGTTCCTGGTGATAAGCCATTCATAACG
TTGAGTGGAACTGAGGCATCTAACACCATAATTACATGGAGTGACGGTGGAGATATTACT
GATTCTCCTACACTAACTGTATTAGCTTCCGATTTTGTTGCAAGATATCTAACAATTCAG
AATTCATTCGGAACAAGTGGAAAAGCTGTAGCACTAAAAGTTAAAGGAGATAGAGTAGCA
TTCTATGGTTGTAGAATTCAATCGTACCAGGACACTTTGTTAGATGATGCTGGGAGGCAT
TATTATAGCAACTGCTATATTGAAGGGGCCGTTGATTTCATTTTTGGAAATGCAGCCTCT
CTCTATGAAAGATGCCATATTCATTCAGTTGCAGCAGGAGCAATCACTGCTCAAGGAAGA
GAGTCCCCTTTAGAAAATACAGGATTTACTTTTTTGGGTTGCAAGATAACAGGGACAGGA
GGGAGCACTGCATTAGGAAGGCCATGGGGTTCATATTCAAGGGTGGTATTTGCCTACACA
TTTATGTCCTCTATCATACAGCCTGAGGGATGGAATGACTGGGGAGATTCTAGCAAGCAA
AGGGGCTAA

Peptide Sequence

PEP ID

XP_016436559.1
PEP Infomation

PREDICTED: putative pectinesterase 11 isoform X2 [Nicotiana tabacum]
Sequence

MDAASLIIKFHVIFLILLLVCSNSNSTLTMAANDSSSGGPTNFSTAILIRVDQSGQGDFK
KIQDAIDAVPSNNSELFFIWVKPGTYREKIVVPGDKPFITLSGTEASNTIITWSDGGDIT
DSPTLTVLASDFVARYLTIQNSFGTSGKAVALKVKGDRVAFYGCRIQSYQDTLLDDAGRH
YYSNCYIEGAVDFIFGNAASLYERCHIHSVAAGAITAQGRESPLENTGFTFLGCKITGTG
GSTALGRPWGSYSRVVFAYTFMSSIIQPEGWNDWGDSSKQRG

Transcript Sequence

Gene sequence data has not been registered.